IL_6NUO_240

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GGGAG*CGUGGAUC

Length

13 nucleotides

Bulged bases

6NUO|1|YA|G|99

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NUO_240 not in the Motif Atlas

Homologous match to IL_7RQB_004

Geometric discrepancy: 0.0839

The information below is about IL_7RQB_004

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_45067.2

Basepair signature

cWW-tSS-L-tSH-L-R-R-cWW-L

Number of instances in this motif group

18

Unit IDs

6NUO|1|YA|G|80
6NUO|1|YA|G|81
6NUO|1|YA|G|82
6NUO|1|YA|A|83
6NUO|1|YA|G|84
*
6NUO|1|YA|C|96
6NUO|1|YA|G|97
6NUO|1|YA|U|98
6NUO|1|YA|G|99
6NUO|1|YA|G|100
6NUO|1|YA|A|101
6NUO|1|YA|U|102
6NUO|1|YA|C|103

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y2

50S ribosomal protein L29

Chain YY

50S ribosomal protein L24