IL_6NUO_249

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

UAG*CGAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NUO_249 not in the Motif Atlas

Homologous match to IL_7RQB_013

Geometric discrepancy: 0.063

The information below is about IL_7RQB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69440.1

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

3

Unit IDs

6NUO|1|YA|U|317
6NUO|1|YA|A|318
6NUO|1|YA|G|319
*
6NUO|1|YA|C|367
6NUO|1|YA|G|368
6NUO|1|YA|A|369
6NUO|1|YA|A|370
6NUO|1|YA|A|371

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YY

50S ribosomal protein L24