IL_6NUO_375

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

AUA*UGU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NUO_375 not in the Motif Atlas

Homologous match to IL_9DFE_029

Geometric discrepancy: 0.116

The information below is about IL_9DFE_029

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42997.3

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

20

Unit IDs

6NUO|1|YA|A|917
6NUO|1|YA|U|918
6NUO|1|YA|A|919
*
6NUO|1|YA|U|951
6NUO|1|YA|G|952
6NUO|1|YA|U|953

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YQ

50S ribosomal protein L16

Chain YZ

50S ribosomal protein L25