IL_6NWY_357
3D structure
- PDB id
- 6NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- ACGUGGCUACCUGCGAUAAGC*GAUGU
- Length
- 26 nucleotides
- Bulged bases
- 6NWY|1|RA|U|72
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6NWY_357 not in the Motif Atlas
- Geometric match to IL_5TBW_144
- Geometric discrepancy: 0.2385
- The information below is about IL_5TBW_144
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44998.1
- Basepair signature
- cWW-cWW-R-cWW-tSS-R-cWW-cWW-L-cWW-L-L-L-cWW-L-cSS-L-R-L-R
- Number of instances in this motif group
- 2
Unit IDs
6NWY|1|RA|A|56
6NWY|1|RA|C|57
6NWY|1|RA|G|58
6NWY|1|RA|U|59
6NWY|1|RA|G|60
6NWY|1|RA|G|61
6NWY|1|RA|C|62
6NWY|1|RA|U|63
6NWY|1|RA|A|64
6NWY|1|RA|C|65
6NWY|1|RA|C|66
6NWY|1|RA|U|67
6NWY|1|RA|G|68
6NWY|1|RA|C|69
6NWY|1|RA|G|70
6NWY|1|RA|A|71
6NWY|1|RA|U|72
6NWY|1|RA|A|73
6NWY|1|RA|A|74
6NWY|1|RA|G|75
6NWY|1|RA|C|76
*
6NWY|1|RA|G|110
6NWY|1|RA|A|111
6NWY|1|RA|U|112
6NWY|1|RA|G|113
6NWY|1|RA|U|114
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R2
- 50S ribosomal protein L29
- Chain R7
- 50S ribosomal protein L34
- Chain RX
- 50S ribosomal protein L23
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