IL_6O3M_042

3D structure

PDB id

6O3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.97 Å

Loop

Sequence

CG*CUG

Length

5 nucleotides

Bulged bases

6O3M|1|QA|U|1196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O3M_042 not in the Motif Atlas

Homologous match to IL_6CZR_156

Geometric discrepancy: 0.183

The information below is about IL_6CZR_156

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

123

Unit IDs

6O3M|1|QA|C|1060
6O3M|1|QA|G|1061
*
6O3M|1|QA|C|1195
6O3M|1|QA|U|1196
6O3M|1|QA|G|1197

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QC

30S ribosomal protein S3

Chain QE

30S ribosomal protein S5

Chain QI

30S ribosomal protein S9

Chain QJ

30S ribosomal protein S10

Chain QN

30S ribosomal protein S14 type Z