IL_6O3M_051

3D structure

PDB id

6O3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.97 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

6O3M|1|QA|C|1400, 6O3M|1|QA|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O3M_051 not in the Motif Atlas

Homologous match to IL_4LFB_056

Geometric discrepancy: 0.1789

The information below is about IL_4LFB_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

6O3M|1|QA|C|1399
6O3M|1|QA|C|1400
6O3M|1|QA|G|1401
*
6O3M|1|QA|C|1501
6O3M|1|QA|A|1502
6O3M|1|QA|A|1503
6O3M|1|QA|G|1504

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QK

30S ribosomal protein S11

Chain QV

Transfer RNA; tRNA

Chain QX

mRNA