Motif IL_18228.1 Version IL_18228.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 1-5 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4LFB_056 | 4LFB | 0.2255 | 2 | A | SSU rRNA | C | 1501 | A | 1502 | G | 1504 | * | C | 1399 | G | 1401 | cWW | cWW |
| 2 | IL_8P9A_452 | 8P9A | 0.0705 | 2 | sR | SSU rRNA | C | 1764 | A | 1765 | G | 1767 | * | C | 1636 | G | 1638 | cWW | cWW |
| 3 | IL_8CRE_466 | 8CRE | 0.0000 | 2 | CM | SSU rRNA | C | 1751 | A | 1752 | G | 1754 | * | C | 1623 | G | 1625 | cWW | cWW |
| 4 | IL_8GLP_274 | 8GLP | 0.0502 | 2 | S2 | SSU rRNA | C | 1833 | A | 1834 | G | 1836 | * | C | 1700 | G | 1702 | cWW | cWW |
| 5 | IL_8B0X_057 | 8B0X | 0.0861 | 2 | A | SSU rRNA | C | 1501 | A | 1502 | G | 1504 | * | C | 1399 | G | 1401 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAG*CCG | 4 |
| CAAG*C(5MC)G | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AA*C | 4 |
| AA*(5MC) | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (5)
- Basepair signature
- cWW-L-cWW
- Heat map statistics
- Min 0.05 | Avg 0.11 | Max 0.25
Coloring options: