IL_6O3M_070

3D structure

PDB id

6O3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.97 Å

Loop

Sequence

CGAAU*AUAG

Length

9 nucleotides

Bulged bases

6O3M|1|RA|A|283

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O3M_070 not in the Motif Atlas

Homologous match to IL_7RQB_011

Geometric discrepancy: 0.1389

The information below is about IL_7RQB_011

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

6O3M|1|RA|C|280
6O3M|1|RA|G|281
6O3M|1|RA|A|282
6O3M|1|RA|A|283
6O3M|1|RA|U|284
*
6O3M|1|RA|A|357
6O3M|1|RA|U|358
6O3M|1|RA|A|359
6O3M|1|RA|G|360

Current chains

Chain RA

23S rRNA

Nearby chains