IL_6O3M_091

3D structure

PDB id

6O3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.97 Å

Loop

Sequence

GGG*CUAC

Length

7 nucleotides

Bulged bases

6O3M|1|RA|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O3M_091 not in the Motif Atlas

Geometric match to IL_3KTW_002

Geometric discrepancy: 0.2854

The information below is about IL_3KTW_002

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_43275.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

30

Unit IDs

6O3M|1|RA|G|880
6O3M|1|RA|G|881
6O3M|1|RA|G|882
*
6O3M|1|RA|C|894
6O3M|1|RA|U|895
6O3M|1|RA|A|896
6O3M|1|RA|C|897

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RZ

50S ribosomal protein L25