IL_6O3M_309
3D structure
- PDB id
- 6O3M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.97 Å
Loop
- Sequence
- GGGAG*CGAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6O3M_309 not in the Motif Atlas
- Homologous match to IL_7RQB_075
- Geometric discrepancy: 0.0909
- The information below is about IL_7RQB_075
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_56467.8
- Basepair signature
- cWW-tSH-tSH-tHS-cWW
- Number of instances in this motif group
- 29
Unit IDs
6O3M|1|YA|G|1856
6O3M|1|YA|G|1857
6O3M|1|YA|G|1858
6O3M|1|YA|A|1859
6O3M|1|YA|G|1860
*
6O3M|1|YA|C|1882
6O3M|1|YA|G|1883
6O3M|1|YA|A|1884
6O3M|1|YA|A|1885
6O3M|1|YA|C|1886
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y1
- 50S ribosomal protein L28
Coloring options: