IL_6O7K_021

3D structure

PDB id

6O7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CAG*CAGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O7K_021 not in the Motif Atlas

Homologous match to IL_5J7L_021

Geometric discrepancy: 0.1492

The information below is about IL_5J7L_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_33323.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

6O7K|1|g|C|440
6O7K|1|g|A|441
6O7K|1|g|G|442
*
6O7K|1|g|C|492
6O7K|1|g|A|493
6O7K|1|g|G|494
6O7K|1|g|A|495
6O7K|1|g|A|496
6O7K|1|g|G|497

Current chains

Chain g

16S ribosomal RNA

Nearby chains

Chain l

30S ribosomal protein S4