3D structure

PDB id
6O7K (explore in PDB, NAKB, or RNA 3D Hub)
Description
30S initiation complex
Experimental method
ELECTRON MICROSCOPY
Resolution
4.2 Å

Loop

Sequence
CCG*CAAG
Length
7 nucleotides
Bulged bases
6O7K|1|g|C|1400, 6O7K|1|g|A|1503
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6O7K_057 not in the Motif Atlas
Homologous match to IL_5J7L_058
Geometric discrepancy: 0.15
The information below is about IL_5J7L_058
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_61438.4
Basepair signature
cWW-L-cWW
Number of instances in this motif group
4

Unit IDs

6O7K|1|g|C|1399
6O7K|1|g|C|1400
6O7K|1|g|G|1401
*
6O7K|1|g|C|1501
6O7K|1|g|A|1502
6O7K|1|g|A|1503
6O7K|1|g|G|1504

Current chains

Chain g
16S ribosomal RNA

Nearby chains

Chain N
mRNA
Chain v
Transfer RNA; tRNA

Coloring options:


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