IL_6O8W_054

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

CAAUG*CUAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O8W_054 not in the Motif Atlas

Homologous match to IL_4WF9_054

Geometric discrepancy: 0.2691

The information below is about IL_4WF9_054

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

6O8W|1|A|C|1459
6O8W|1|A|A|1460
6O8W|1|A|A|1461
6O8W|1|A|U|1462
6O8W|1|A|G|1463
*
6O8W|1|A|C|1623
6O8W|1|A|U|1624
6O8W|1|A|A|1625
6O8W|1|A|G|1626

Current chains

Chain A

50S subunit

Nearby chains