IL_6O8W_084

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

GUACAGGAUAG*CC

Length

13 nucleotides

Bulged bases

6O8W|1|A|A|2126, 6O8W|1|A|A|2133

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O8W_084 not in the Motif Atlas

Geometric match to IL_7Q82_001

Geometric discrepancy: 0.1507

The information below is about IL_7Q82_001

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.1

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

6O8W|1|A|G|2124
6O8W|1|A|U|2125
6O8W|1|A|A|2126
6O8W|1|A|C|2127
6O8W|1|A|A|2128
6O8W|1|A|G|2129
6O8W|1|A|G|2130
6O8W|1|A|A|2131
6O8W|1|A|U|2132
6O8W|1|A|A|2133
6O8W|1|A|G|2134
*
6O8W|1|A|C|2192
6O8W|1|A|C|2193

Current chains

Chain A

50S subunit

Nearby chains

Chain u

Transfer RNA; tRNA