IL_6O8W_137

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

6O8W|1|a|A|587, 6O8W|1|a|A|588

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O8W_137 not in the Motif Atlas

Homologous match to IL_6CZR_134

Geometric discrepancy: 0.1492

The information below is about IL_6CZR_134

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.5

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

6O8W|1|a|C|584
6O8W|1|a|G|585
6O8W|1|a|U|586
6O8W|1|a|A|587
6O8W|1|a|A|588
6O8W|1|a|A|589
6O8W|1|a|G|590
*
6O8W|1|a|C|896
6O8W|1|a|G|897

Current chains

Chain a

16S rRNA

Nearby chains

Chain l

30S ribosomal protein S12

Chain q

30S ribosomal protein S17