IL_6O8X_004
3D structure
- PDB id
- 6O8X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.68 Å
Loop
- Sequence
- GGGAG*CUAUGAUC
- Length
- 13 nucleotides
- Bulged bases
- 6O8X|1|A|U|101
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6O8X_004 not in the Motif Atlas
- Homologous match to IL_4WF9_004
- Geometric discrepancy: 0.1315
- The information below is about IL_4WF9_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_71972.1
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
6O8X|1|A|G|82
6O8X|1|A|G|83
6O8X|1|A|G|84
6O8X|1|A|A|85
6O8X|1|A|G|86
*
6O8X|1|A|C|98
6O8X|1|A|U|99
6O8X|1|A|A|100
6O8X|1|A|U|101
6O8X|1|A|G|102
6O8X|1|A|A|103
6O8X|1|A|U|104
6O8X|1|A|C|105
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain V
- 50S ribosomal protein L24
- Chain Z
- 50S ribosomal protein L29
Coloring options: