IL_6O8X_024

3D structure

PDB id

6O8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02

Experimental method

ELECTRON MICROSCOPY

Resolution

3.68 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O8X_024 not in the Motif Atlas

Homologous match to IL_7RQB_021

Geometric discrepancy: 0.1246

The information below is about IL_7RQB_021

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

6O8X|1|A|U|743
6O8X|1|A|G|744
6O8X|1|A|A|745
6O8X|1|A|A|746
6O8X|1|A|G|747
*
6O8X|1|A|U|764
6O8X|1|A|G|765
6O8X|1|A|G|766
6O8X|1|A|A|767
6O8X|1|A|G|768

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2