IL_6O8X_127
3D structure
- PDB id
- 6O8X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.68 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 6O8X|1|a|U|179
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6O8X_127 not in the Motif Atlas
- Homologous match to IL_5J7L_012
- Geometric discrepancy: 0.1454
- The information below is about IL_5J7L_012
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.6
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 3
Unit IDs
6O8X|1|a|G|153
6O8X|1|a|G|154
6O8X|1|a|A|155
6O8X|1|a|U|156
6O8X|1|a|A|157
6O8X|1|a|A|158
6O8X|1|a|C|159
*
6O8X|1|a|G|174
6O8X|1|a|C|175
6O8X|1|a|U|176
6O8X|1|a|A|177
6O8X|1|a|A|178
6O8X|1|a|U|179
6O8X|1|a|A|180
6O8X|1|a|C|181
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain t
- 30S ribosomal protein S20
Coloring options: