IL_6O8X_166

3D structure

PDB id

6O8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02

Experimental method

ELECTRON MICROSCOPY

Resolution

3.68 Å

Loop

Sequence

CUAG*CAUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O8X_166 not in the Motif Atlas

Geometric match to IL_4V88_461

Geometric discrepancy: 0.3535

The information below is about IL_4V88_461

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_36174.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

15

Unit IDs

6O8X|1|a|C|1274
6O8X|1|a|U|1275
6O8X|1|a|A|1276
6O8X|1|a|G|1277
*
6O8X|1|a|C|1288
6O8X|1|a|A|1289
6O8X|1|a|U|1290
6O8X|1|a|G|1291

Current chains

Chain a

16S rRNA

Nearby chains