IL_6O8X_169

3D structure

PDB id

6O8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02

Experimental method

ELECTRON MICROSCOPY

Resolution

3.68 Å

Loop

Sequence

CAC*GAAG

Length

7 nucleotides

Bulged bases

6O8X|1|a|A|1509

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O8X_169 not in the Motif Atlas

Geometric match to IL_7A0S_092

Geometric discrepancy: 0.3084

The information below is about IL_7A0S_092

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

6O8X|1|a|C|1422
6O8X|1|a|A|1423
6O8X|1|a|C|1424
*
6O8X|1|a|G|1507
6O8X|1|a|A|1508
6O8X|1|a|A|1509
6O8X|1|a|G|1510

Current chains

Chain a

16S rRNA

Nearby chains

Chain l

30S ribosomal protein S12