IL_6O8X_177
3D structure
- PDB id
- 6O8X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.68 Å
Loop
- Sequence
- ACGGGACUAACACCGAUAUGC*GAUUU
- Length
- 26 nucleotides
- Bulged bases
- 6O8X|1|A|U|73
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6O8X_177 not in the Motif Atlas
- Geometric match to IL_5TBW_144
- Geometric discrepancy: 0.2568
- The information below is about IL_5TBW_144
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44998.1
- Basepair signature
- cWW-cWW-R-cWW-tSS-R-cWW-cWW-L-cWW-L-L-L-cWW-L-cSS-L-R-L-R
- Number of instances in this motif group
- 2
Unit IDs
6O8X|1|A|A|57
6O8X|1|A|C|58
6O8X|1|A|G|59
6O8X|1|A|G|60
6O8X|1|A|G|61
6O8X|1|A|A|62
6O8X|1|A|C|63
6O8X|1|A|U|64
6O8X|1|A|A|65
6O8X|1|A|A|66
6O8X|1|A|C|67
6O8X|1|A|A|68
6O8X|1|A|C|69
6O8X|1|A|C|70
6O8X|1|A|G|71
6O8X|1|A|A|72
6O8X|1|A|U|73
6O8X|1|A|A|74
6O8X|1|A|U|75
6O8X|1|A|G|76
6O8X|1|A|C|77
*
6O8X|1|A|G|110
6O8X|1|A|A|111
6O8X|1|A|U|112
6O8X|1|A|U|113
6O8X|1|A|U|114
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L34
- Chain U
- 50S ribosomal protein L23
- Chain Z
- 50S ribosomal protein L29
Coloring options: