IL_6O8X_201
3D structure
- PDB id
- 6O8X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.68 Å
Loop
- Sequence
- GGAGUACGA*UUGAAAC
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6O8X_201 not in the Motif Atlas
- Homologous match to IL_6CZR_146
- Geometric discrepancy: 0.1268
- The information below is about IL_6CZR_146
- Detailed Annotation
- 9x7 Sarcin-Ricin with inserted C; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_68633.1
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-R-L-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
6O8X|1|a|G|903
6O8X|1|a|G|904
6O8X|1|a|A|905
6O8X|1|a|G|906
6O8X|1|a|U|907
6O8X|1|a|A|908
6O8X|1|a|C|909
6O8X|1|a|G|910
6O8X|1|a|A|911
*
6O8X|1|a|U|920
6O8X|1|a|U|921
6O8X|1|a|G|922
6O8X|1|a|A|923
6O8X|1|a|A|924
6O8X|1|a|A|925
6O8X|1|a|C|926
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
Coloring options: