IL_6O8Z_057

3D structure

PDB id

6O8Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CUAA*UGACG

Length

9 nucleotides

Bulged bases

6O8Z|1|A|C|1600

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O8Z_057 not in the Motif Atlas

Homologous match to IL_7RQB_057

Geometric discrepancy: 0.187

The information below is about IL_7RQB_057

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

6O8Z|1|A|C|1479
6O8Z|1|A|U|1480
6O8Z|1|A|A|1481
6O8Z|1|A|A|1482
*
6O8Z|1|A|U|1597
6O8Z|1|A|G|1598
6O8Z|1|A|A|1599
6O8Z|1|A|C|1600
6O8Z|1|A|G|1601

Current chains

Chain A

23S rRNA

Nearby chains