IL_6O8Z_085

3D structure

PDB id

6O8Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

GGAG*CGCUGGUGGGAUAC

Length

18 nucleotides

Bulged bases

6O8Z|1|A|G|2183, 6O8Z|1|A|A|2185, 6O8Z|1|A|U|2186

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O8Z_085 not in the Motif Atlas

Homologous match to IL_7RQB_086

Geometric discrepancy: 0.5654

The information below is about IL_7RQB_086

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O8Z|1|A|G|2138
6O8Z|1|A|G|2139
6O8Z|1|A|A|2140
6O8Z|1|A|G|2141
*
6O8Z|1|A|C|2175
6O8Z|1|A|G|2176
6O8Z|1|A|C|2177
6O8Z|1|A|U|2178
6O8Z|1|A|G|2179
6O8Z|1|A|G|2180
6O8Z|1|A|U|2181
6O8Z|1|A|G|2182
6O8Z|1|A|G|2183
6O8Z|1|A|G|2184
6O8Z|1|A|A|2185
6O8Z|1|A|U|2186
6O8Z|1|A|A|2187
6O8Z|1|A|C|2188

Current chains

Chain A

23S rRNA

Nearby chains