IL_6O8Z_103
3D structure
- PDB id
- 6O8Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.49 Å
Loop
- Sequence
- UUGAG*CAAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 6O8Z|1|A|G|2794
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6O8Z_103 not in the Motif Atlas
- Homologous match to IL_4WF9_099
- Geometric discrepancy: 0.1031
- The information below is about IL_4WF9_099
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.4
- Basepair signature
- cWW-tSH-tHW-tHS-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
6O8Z|1|A|U|2650
6O8Z|1|A|U|2651
6O8Z|1|A|G|2652
6O8Z|1|A|A|2653
6O8Z|1|A|G|2654
*
6O8Z|1|A|C|2788
6O8Z|1|A|A|2789
6O8Z|1|A|A|2790
6O8Z|1|A|G|2791
6O8Z|1|A|A|2792
6O8Z|1|A|U|2793
6O8Z|1|A|G|2794
6O8Z|1|A|A|2795
6O8Z|1|A|G|2796
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain K
- 50S ribosomal protein L13
Coloring options: