IL_6O90_074

3D structure

PDB id

6O90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

UUAG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O90_074 not in the Motif Atlas

Homologous match to IL_5J7L_317

Geometric discrepancy: 0.1621

The information below is about IL_5J7L_317

Detailed Annotation

UAA/GAN related

Broad Annotation

No text annotation

Motif group

IL_77691.5

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

6O90|1|A|U|1878
6O90|1|A|U|1879
6O90|1|A|A|1880
6O90|1|A|G|1881
*
6O90|1|A|C|1888
6O90|1|A|G|1889
6O90|1|A|A|1890
6O90|1|A|A|1891
6O90|1|A|G|1892

Current chains

Chain A

23S rRNA

Nearby chains