3D structure

PDB id
6O90 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05
Experimental method
ELECTRON MICROSCOPY
Resolution
3.49 Å

Loop

Sequence
CUAGGAU*AUUUAAAGAGUGCGUAAUAGCUCACUAG
Length
35 nucleotides
Bulged bases
6O90|1|A|A|1128, 6O90|1|A|G|1129, 6O90|1|A|A|1135, 6O90|1|A|G|1139, 6O90|1|A|C|1142, 6O90|1|A|A|1146
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6O90|1|A|C|1092
6O90|1|A|U|1093
6O90|1|A|A|1094
6O90|1|A|G|1095
6O90|1|A|G|1096
6O90|1|A|A|1097
6O90|1|A|U|1098
*
6O90|1|A|A|1120
6O90|1|A|U|1121
6O90|1|A|U|1122
6O90|1|A|U|1123
6O90|1|A|A|1124
6O90|1|A|A|1125
6O90|1|A|A|1126
6O90|1|A|G|1127
6O90|1|A|A|1128
6O90|1|A|G|1129
6O90|1|A|U|1130
6O90|1|A|G|1131
6O90|1|A|C|1132
6O90|1|A|G|1133
6O90|1|A|U|1134
6O90|1|A|A|1135
6O90|1|A|A|1136
6O90|1|A|U|1137
6O90|1|A|A|1138
6O90|1|A|G|1139
6O90|1|A|C|1140
6O90|1|A|U|1141
6O90|1|A|C|1142
6O90|1|A|A|1143
6O90|1|A|C|1144
6O90|1|A|U|1145
6O90|1|A|A|1146
6O90|1|A|G|1147

Current chains

Chain A
23S rRNA

Nearby chains

Chain 6
50S ribosomal protein L36
Chain G
50S ribosomal protein L6

Coloring options:

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