IL_6O9J_042
3D structure
- PDB id
- 6O9J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Elongation Competent Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAAG*CGGC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6O9J_042 not in the Motif Atlas
- Homologous match to IL_5J7L_283
- Geometric discrepancy: 0.1034
- The information below is about IL_5J7L_283
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
6O9J|1|B|G|1038
6O9J|1|B|A|1039
6O9J|1|B|A|1040
6O9J|1|B|G|1041
*
6O9J|1|B|C|1114
6O9J|1|B|G|1115
6O9J|1|B|G|1116
6O9J|1|B|C|1117
Current chains
- Chain B
- 23S rRNA
Nearby chains
- Chain 5
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
- Chain M
- 50S ribosomal protein L16
- Chain V
- 50S ribosomal protein L25
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