IL_6O9J_124

3D structure

PDB id

6O9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Elongation Competent Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UAGU*AG

Length

6 nucleotides

Bulged bases

6O9J|1|a|G|251

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O9J_124 not in the Motif Atlas

Homologous match to IL_5J7L_015

Geometric discrepancy: 0.3393

The information below is about IL_5J7L_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47074.2

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

4

Unit IDs

6O9J|1|a|U|249
6O9J|1|a|A|250
6O9J|1|a|G|251
6O9J|1|a|U|252
*
6O9J|1|a|A|274
6O9J|1|a|G|275

Current chains

Chain a

16S rRNA

Nearby chains

Chain B

Large subunit ribosomal RNA; LSU rRNA

Chain q

30S ribosomal protein S17