IL_6O9J_127

3D structure

PDB id

6O9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Elongation Competent Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

ACAAU*AU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6O9J_127 not in the Motif Atlas

Geometric match to IL_4LFB_015

Geometric discrepancy: 0.146

The information below is about IL_4LFB_015

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_26900.1

Basepair signature

cWW-cSH-cWS-tWH-cWW

Number of instances in this motif group

5

Unit IDs

6O9J|1|a|A|371
6O9J|1|a|C|372
6O9J|1|a|A|373
6O9J|1|a|A|374
6O9J|1|a|U|375
*
6O9J|1|a|A|389
6O9J|1|a|U|390

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16