IL_6OF6_019

3D structure

PDB id

6OF6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GAAACC*GACUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OF6_019 not in the Motif Atlas

Homologous match to IL_4LFB_019

Geometric discrepancy: 0.128

The information below is about IL_4LFB_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31561.1

Basepair signature

cWW-L-R-tWH-tWH-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

6OF6|1|QA|G|450
6OF6|1|QA|A|451
6OF6|1|QA|A|452
6OF6|1|QA|A|453
6OF6|1|QA|C|454
6OF6|1|QA|C|455
*
6OF6|1|QA|G|477
6OF6|1|QA|A|478
6OF6|1|QA|C|479
6OF6|1|QA|U|480
6OF6|1|QA|G|481
6OF6|1|QA|A|482
6OF6|1|QA|C|483

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QP

30S ribosomal protein S16