IL_6OF6_045

3D structure

PDB id

6OF6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CCAGC*GG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OF6_045 not in the Motif Atlas

Geometric match to IL_4LFB_049

Geometric discrepancy: 0.3044

The information below is about IL_4LFB_049

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_15052.4

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

8

Unit IDs

6OF6|1|QA|C|1128
6OF6|1|QA|C|1129
6OF6|1|QA|A|1130
6OF6|1|QA|G|1131
6OF6|1|QA|C|1132
*
6OF6|1|QA|G|1142
6OF6|1|QA|G|1143

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QI

30S ribosomal protein S9