3D structure

PDB id
6OF6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
CGAUG*CUAAG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6OF6_110 not in the Motif Atlas
Geometric match to IL_7RQB_055
Geometric discrepancy: 0.1466
The information below is about IL_7RQB_055
Detailed Annotation
UAA/GAN
Broad Annotation
No text annotation
Motif group
IL_89002.2
Basepair signature
cWW-tWH-L-tHS-cWW
Number of instances in this motif group
20

Unit IDs

6OF6|1|RA|C|1417
6OF6|1|RA|G|1418
6OF6|1|RA|A|1419
6OF6|1|RA|U|1420
6OF6|1|RA|G|1421
*
6OF6|1|RA|C|1577
6OF6|1|RA|U|1578
6OF6|1|RA|A|1579
6OF6|1|RA|A|1580
6OF6|1|RA|G|1581

Current chains

Chain RA
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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