IL_6OF6_128
3D structure
- PDB id
- 6OF6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GAAG*CC
- Length
- 6 nucleotides
- Bulged bases
- 6OF6|1|RA|A|1847
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OF6_128 not in the Motif Atlas
- Homologous match to IL_7RQB_073
- Geometric discrepancy: 0.1036
- The information below is about IL_7RQB_073
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_88739.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
6OF6|1|RA|G|1846
6OF6|1|RA|A|1847
6OF6|1|RA|A|1848
6OF6|1|RA|G|1849
*
6OF6|1|RA|C|1893
6OF6|1|RA|C|1894
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain QA
- Small subunit ribosomal RNA; SSU rRNA
- Chain QW
- Transfer RNA; tRNA
- Chain RD
- 50S ribosomal protein L2
Coloring options: