IL_6OF6_361

3D structure

PDB id

6OF6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OF6_361 not in the Motif Atlas

Homologous match to IL_3U4M_001

Geometric discrepancy: 0.2432

The information below is about IL_3U4M_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_71625.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

65

Unit IDs

6OF6|1|RA|C|2108
6OF6|1|RA|U|2109
6OF6|1|RA|G|2110
*
6OF6|1|RA|C|2179
6OF6|1|RA|U|2180
6OF6|1|RA|G|2181

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QW

Transfer RNA; tRNA