IL_6OF6_362
3D structure
- PDB id
- 6OF6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GCGUAGGAUAGG*CCC
- Length
- 15 nucleotides
- Bulged bases
- 6OF6|1|RA|C|2111, 6OF6|1|RA|G|2112, 6OF6|1|RA|U|2113, 6OF6|1|RA|A|2114, 6OF6|1|RA|G|2115, 6OF6|1|RA|U|2118, 6OF6|1|RA|A|2119
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OF6_362 not in the Motif Atlas
- Geometric match to IL_4V88_406
- Geometric discrepancy: 0.2056
- The information below is about IL_4V88_406
- Detailed Annotation
- Isolated near basepair
- Broad Annotation
- Isolated near basepair
- Motif group
- IL_76004.2
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 18
Unit IDs
6OF6|1|RA|G|2110
6OF6|1|RA|C|2111
6OF6|1|RA|G|2112
6OF6|1|RA|U|2113
6OF6|1|RA|A|2114
6OF6|1|RA|G|2115
6OF6|1|RA|G|2116
6OF6|1|RA|A|2117
6OF6|1|RA|U|2118
6OF6|1|RA|A|2119
6OF6|1|RA|G|2120
6OF6|1|RA|G|2121
*
6OF6|1|RA|C|2177
6OF6|1|RA|C|2178
6OF6|1|RA|C|2179
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain QW
- Transfer RNA; tRNA
Coloring options: