IL_6OG7_182

3D structure

PDB id

6OG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UGUAG*UGAGG

Length

10 nucleotides

Bulged bases

6OG7|1|1|G|1475

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OG7_182 not in the Motif Atlas

Homologous match to IL_8B0X_119

Geometric discrepancy: 0.5949

The information below is about IL_8B0X_119

Detailed Annotation

tSH-tWH-tHS

Broad Annotation

tSH-tWH-tHS

Motif group

IL_38862.5

Basepair signature

cWW-cSH-R-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

6OG7|1|1|U|1474
6OG7|1|1|G|1475
6OG7|1|1|U|1476
6OG7|1|1|A|1477
6OG7|1|1|G|1478
*
6OG7|1|1|U|1513
6OG7|1|1|G|1514
6OG7|1|1|A|1515
6OG7|1|1|G|1516
6OG7|1|1|G|1517

Current chains

Chain 1

23S ribosomal RNA

Nearby chains