IL_6OGG_075
3D structure
- PDB id
- 6OGG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- ACG*CUAU
- Length
- 7 nucleotides
- Bulged bases
- 6OGG|1|1|C|2055, 6OGG|1|1|U|2613, 6OGG|1|1|A|2614
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OGG_075 not in the Motif Atlas
- Homologous match to IL_5J7L_321
- Geometric discrepancy: 0.2663
- The information below is about IL_5J7L_321
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_83389.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
6OGG|1|1|A|2054
6OGG|1|1|C|2055
6OGG|1|1|G|2056
*
6OGG|1|1|C|2612
6OGG|1|1|U|2613
6OGG|1|1|A|2614
6OGG|1|1|U|2615
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain B
- 50S ribosomal protein L32
- Chain c
- 50S ribosomal protein L3
- Chain s
- 50S ribosomal protein L22
Coloring options: