3D structure

PDB id
6OGG (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).
Experimental method
ELECTRON MICROSCOPY
Resolution
4.2 Å

Loop

Sequence
UGAAGAAGG*UUGUAAAG
Length
17 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OGG|1|3|U|409
6OGG|1|3|G|410
6OGG|1|3|A|411
6OGG|1|3|A|412
6OGG|1|3|G|413
6OGG|1|3|A|414
6OGG|1|3|A|415
6OGG|1|3|G|416
6OGG|1|3|G|417
*
6OGG|1|3|U|426
6OGG|1|3|U|427
6OGG|1|3|G|428
6OGG|1|3|U|429
6OGG|1|3|A|430
6OGG|1|3|A|431
6OGG|1|3|A|432
6OGG|1|3|G|433

Current chains

Chain 3
16S ribosomal RNA

Nearby chains

Chain I
30S ribosomal protein S4

Coloring options:

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