3D structure

PDB id
6OGG (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).
Experimental method
ELECTRON MICROSCOPY
Resolution
4.2 Å

Loop

Sequence
UAGAGG*CUGGA
Length
11 nucleotides
Bulged bases
6OGG|1|3|A|665
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OGG|1|3|U|662
6OGG|1|3|A|663
6OGG|1|3|G|664
6OGG|1|3|A|665
6OGG|1|3|G|666
6OGG|1|3|G|667
*
6OGG|1|3|C|739
6OGG|1|3|U|740
6OGG|1|3|G|741
6OGG|1|3|G|742
6OGG|1|3|A|743

Current chains

Chain 3
16S ribosomal RNA

Nearby chains

Chain K
30S ribosomal protein S6
Chain T
30S ribosomal protein S15
Chain W
30S ribosomal protein S18
Chain Z
30S ribosomal protein S21

Coloring options:

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