IL_6OGG_160

3D structure

PDB id

6OGG (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

AUACAAAG*CAUAAAGU

Length

16 nucleotides

Bulged bases

6OGG|1|3|U|1286

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OGG|1|3|A|1246
6OGG|1|3|U|1247
6OGG|1|3|A|1248
6OGG|1|3|C|1249
6OGG|1|3|A|1250
6OGG|1|3|A|1251
6OGG|1|3|A|1252
6OGG|1|3|G|1253
*
6OGG|1|3|C|1284
6OGG|1|3|A|1285
6OGG|1|3|U|1286
6OGG|1|3|A|1287
6OGG|1|3|A|1288
6OGG|1|3|A|1289
6OGG|1|3|G|1290
6OGG|1|3|U|1291

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain L

30S ribosomal protein S7

Chain N

30S ribosomal protein S9

Chain O

30S ribosomal protein S10

Chain S

30S ribosomal protein S14