IL_6OGG_176
3D structure
- PDB id
- 6OGG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- CCCAGACAG*UCGAG
- Length
- 14 nucleotides
- Bulged bases
- 6OGG|1|1|C|1045, 6OGG|1|1|A|1046, 6OGG|1|1|C|1049, 6OGG|1|1|A|1050
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OGG|1|1|C|1043
6OGG|1|1|C|1044
6OGG|1|1|C|1045
6OGG|1|1|A|1046
6OGG|1|1|G|1047
6OGG|1|1|A|1048
6OGG|1|1|C|1049
6OGG|1|1|A|1050
6OGG|1|1|G|1051
*
6OGG|1|1|U|1108
6OGG|1|1|C|1109
6OGG|1|1|G|1110
6OGG|1|1|A|1111
6OGG|1|1|G|1112
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain F
- 50S ribosomal protein L36
- Chain f
- 50S ribosomal protein L6
Coloring options: