IL_6OGI_085
3D structure
- PDB id
- 6OGI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUAAUCCUGGUCGGACAUCAGGAGGUUAG*CAUAAG
- Length
- 35 nucleotides
- Bulged bases
- 6OGI|1|1|U|2334, 6OGI|1|1|A|2336
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OGI|1|1|C|2295
6OGI|1|1|U|2296
6OGI|1|1|A|2297
6OGI|1|1|A|2298
6OGI|1|1|U|2299
6OGI|1|1|C|2300
6OGI|1|1|C|2301
6OGI|1|1|U|2302
6OGI|1|1|G|2303
6OGI|1|1|G|2304
6OGI|1|1|U|2305
6OGI|1|1|C|2306
6OGI|1|1|G|2307
6OGI|1|1|G|2308
6OGI|1|1|A|2309
6OGI|1|1|C|2310
6OGI|1|1|A|2311
6OGI|1|1|U|2312
6OGI|1|1|C|2313
6OGI|1|1|A|2314
6OGI|1|1|G|2315
6OGI|1|1|G|2316
6OGI|1|1|A|2317
6OGI|1|1|G|2318
6OGI|1|1|G|2319
6OGI|1|1|U|2320
6OGI|1|1|U|2321
6OGI|1|1|A|2322
6OGI|1|1|G|2323
*
6OGI|1|1|C|2332
6OGI|1|1|A|2333
6OGI|1|1|U|2334
6OGI|1|1|A|2335
6OGI|1|1|A|2336
6OGI|1|1|G|2337
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 5S ribosomal RNA; 5S rRNA
- Chain e
- 50S ribosomal protein L5
- Chain o
- 50S ribosomal protein L18
- Chain w
- 50S ribosomal protein L27
Coloring options: