IL_6OGI_101

3D structure

PDB id

6OGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUGUUC*GGUAGC

Length

12 nucleotides

Bulged bases

6OGI|1|1|U|2689, 6OGI|1|1|U|2690

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OGI|1|1|G|2686
6OGI|1|1|U|2687
6OGI|1|1|G|2688
6OGI|1|1|U|2689
6OGI|1|1|U|2690
6OGI|1|1|C|2691
*
6OGI|1|1|G|2718
6OGI|1|1|G|2719
6OGI|1|1|U|2720
6OGI|1|1|A|2721
6OGI|1|1|G|2722
6OGI|1|1|C|2723

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain c

50S ribosomal protein L3

Chain k

50S ribosomal protein L14

Chain n

50S ribosomal protein L17

Chain p

50S ribosomal protein L19