IL_6OGI_140

3D structure

PDB id

6OGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UAGAGG*CUGGA

Length

11 nucleotides

Bulged bases

6OGI|1|3|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OGI|1|3|U|662
6OGI|1|3|A|663
6OGI|1|3|G|664
6OGI|1|3|A|665
6OGI|1|3|G|666
6OGI|1|3|G|667
*
6OGI|1|3|C|739
6OGI|1|3|U|740
6OGI|1|3|G|741
6OGI|1|3|G|742
6OGI|1|3|A|743

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain K

30S ribosomal protein S6

Chain T

30S ribosomal protein S15

Chain W

30S ribosomal protein S18

Chain Z

30S ribosomal protein S21