IL_6OGI_151

3D structure

PDB id

6OGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGGCU*AGUCAUCA

Length

13 nucleotides

Bulged bases

6OGI|1|3|A|1201

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OGI|1|3|U|1056
6OGI|1|3|G|1057
6OGI|1|3|G|1058
6OGI|1|3|C|1059
6OGI|1|3|U|1060
*
6OGI|1|3|A|1197
6OGI|1|3|G|1198
6OGI|1|3|U|1199
6OGI|1|3|C|1200
6OGI|1|3|A|1201
6OGI|1|3|U|1202
6OGI|1|3|C|1203
6OGI|1|3|A|1204

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain H

30S ribosomal protein S3

Chain O

30S ribosomal protein S10

Chain S

30S ribosomal protein S14