IL_6OGI_153

3D structure

PDB id

6OGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUUGCCAGC*GGGAACUC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OGI|1|3|G|1124
6OGI|1|3|U|1125
6OGI|1|3|U|1126
6OGI|1|3|G|1127
6OGI|1|3|C|1128
6OGI|1|3|C|1129
6OGI|1|3|A|1130
6OGI|1|3|G|1131
6OGI|1|3|C|1132
*
6OGI|1|3|G|1142
6OGI|1|3|G|1143
6OGI|1|3|G|1144
6OGI|1|3|A|1145
6OGI|1|3|A|1146
6OGI|1|3|C|1147
6OGI|1|3|U|1148
6OGI|1|3|C|1149

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain N

30S ribosomal protein S9

Chain O

30S ribosomal protein S10