IL_6OGI_182

3D structure

PDB id

6OGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAUAAGUG*CACGAAAC

Length

16 nucleotides

Bulged bases

6OGI|1|1|A|2765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OGI|1|1|G|2737
6OGI|1|1|A|2738
6OGI|1|1|U|2739
6OGI|1|1|A|2740
6OGI|1|1|A|2741
6OGI|1|1|G|2742
6OGI|1|1|U|2743
6OGI|1|1|G|2744
*
6OGI|1|1|C|2760
6OGI|1|1|A|2761
6OGI|1|1|C|2762
6OGI|1|1|G|2763
6OGI|1|1|A|2764
6OGI|1|1|A|2765
6OGI|1|1|A|2766
6OGI|1|1|C|2767

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L36

Chain f

50S ribosomal protein L6

Chain j

50S ribosomal protein L13