3D structure

PDB id
6OGI (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
GGAUAACU*AGCUAAUAC
Length
17 nucleotides
Bulged bases
6OGI|1|3|U|173
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OGI|1|3|G|147
6OGI|1|3|G|148
6OGI|1|3|A|149
6OGI|1|3|U|150
6OGI|1|3|A|151
6OGI|1|3|A|152
6OGI|1|3|C|153
6OGI|1|3|U|154
*
6OGI|1|3|A|167
6OGI|1|3|G|168
6OGI|1|3|C|169
6OGI|1|3|U|170
6OGI|1|3|A|171
6OGI|1|3|A|172
6OGI|1|3|U|173
6OGI|1|3|A|174
6OGI|1|3|C|175

Current chains

Chain 3
16S ribosomal RNA

Nearby chains

Chain Y
30S ribosomal protein S20

Coloring options:

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