IL_6OGI_189
3D structure
- PDB id
- 6OGI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GAAGGGA*UCAUUGAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OGI_189 not in the Motif Atlas
- Homologous match to IL_6CZR_131
- Geometric discrepancy: 0.5088
- The information below is about IL_6CZR_131
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_30149.1
- Basepair signature
- cWW-L-R-L-R-tWH-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6OGI|1|3|G|450
6OGI|1|3|A|451
6OGI|1|3|A|452
6OGI|1|3|G|453
6OGI|1|3|G|454
6OGI|1|3|G|455
6OGI|1|3|A|456
*
6OGI|1|3|U|476
6OGI|1|3|C|477
6OGI|1|3|A|478
6OGI|1|3|U|479
6OGI|1|3|U|480
6OGI|1|3|G|481
6OGI|1|3|A|482
6OGI|1|3|C|483
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain U
- 30S ribosomal protein S16
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